Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945495.1_cds_XP_016487992.1_78676
CDS Infomation

[gene=LOC107808026] [db_xref=GeneID:107808026] [protein=glutamic acid-rich protein-like] [protein_id=XP_016487992.1] [location=complement(join(62430..62914,63193..64270,66751..66828))] [gbkey=CDS]
Sequence

ATGTCGCGCTGCTTTCCATTTCCACCACAAGGATATGAAAAGAAGCTTAGACCAGAGGAG
GGTGACTTATTGAAAGAGGAGAAAAGGAAGGAGAAAAAACATAAAAAGGAAAAGAAAGAC
AAGGAAAAGAGAGAAGGTAAAGAAAAAAGGGATAAAGACAAAAGTGATGGGAAACACAGA
GAAAAGAAAGAGAAAAAGGATAAACACAGGGACAAGAAGGAAAAGCACAAGGACAAAAAG
AAGGACAAGGACAAGGATAAAGAGAAAAGCAGCATCTCTGAGGAGGCTAGAGTTGCCGCT
CTACCTGGGCCTTCTACTGGAGGAGTTGCCGCTCTACATGGGCCTTCTACTGGAGGGAAA
CTTCACGAGAGAGATGAACATAAAGATAGACACATTAGCTCAGATAAAGGGAGAGATGAA
CATCAGCTCAGAGATAGGGATAGAAACATCAGCTCAGAGAAAAGCAAGCGCCCTGATCAG
TTTCACATCCAGCTTGGCCTCTCTGCTGTTGAGACAGAGGACTCAAAATTTGTGCAGGAG
TTGGGGAGGAGGATCAGAGATGCAGAGAAGGGTGCTCAAAGTCAGTTGGCGGAGAGATTT
CCAGTTGAGTGCAAAAGGGATGAAGAGACAGGCAGGGTGCGCATCAAGGATTCTGGAAAT
TTGGCTGAACACAAGGAAAAGAACAAAGAGAAAGGATTTGTTACCAATAAGATGGATGGG
CAAGCATTCAGGGATGAACTTAAAATTGGAGCTAATGCAATACCTCTCAGCCTTTCTACA
ATGGCAAAAAGCAAATTTGAAGGAGTCCCCAGACCATTGGAAGAAAATGTTGAGAAGACA
AGAGAGGAAAAACAGAAACCTAAAGAAAGACGTTATGACAAACCAAGAGAGAAAAACAAG
GATAAAGATAGGGAAAAGAAAAGTCATGGAAAGCAAAAAGACAAGGAAAAAGAGAAGAAA
AAGGAAGAGAAGGCGAAGGACAAAAGTGAACACAAGAAAAGCCAGGAGGATAAATCAAGA
GACATCAATAAGAATGGCTTTATTGGTCTTAATAACAATAAACTTCCTCTTATATCCAAG
GAAAACATTGCTGGTACAGTCAACGTGGGAGTTGTCAGAAAGAGGAAGGATGTTGAAACT
AATGGTTTCCTGCATGAGAGTGAACTCAGGCATGCTAAATTGCTGCGGCCATCATCCTCT
CAGCAGCCGACACAGAATGGAAAAAAATTTGACACTCACCCAAAAGCAGACCTGTTCTCC
TCCAGTAAACAGGAAGTTGCTACTGATATTAAAGTGGAAAACAAGAAGCACAAGGTGAAT
GGTGGTATAGAAGGCCAGCCATTATGCAGTGCTGAGGCAAAGGCTTCATCCATCATTCCT
GGTGCTGAGGATCAAATAGCTGAAGCGTCTAAAAGACCTCCTCATCCCGATTCCAAGTAT
CTAAGCCAGATACTCGCAGTTCCCAAGGTGGACGATTGGTCTGGGTTTGATGACCAGGAA
TGGTTGTTAAGCGAAAGAACTCCGGCTAAGAAAACTGAGACGTGTCCAGATGAAGTCAAT
AAGGAACATTGGGTGTGGTCTGAAGCTTTGCAAATAGAGGCTGCTGATGTTTGTGCTCTG
CCATATGTTATACCTTATTGA

Peptide Sequence

PEP ID

XP_016487992.1
PEP Infomation

PREDICTED: glutamic acid-rich protein-like [Nicotiana tabacum]
Sequence

MSRCFPFPPQGYEKKLRPEEGDLLKEEKRKEKKHKKEKKDKEKREGKEKRDKDKSDGKHR
EKKEKKDKHRDKKEKHKDKKKDKDKDKEKSSISEEARVAALPGPSTGGVAALHGPSTGGK
LHERDEHKDRHISSDKGRDEHQLRDRDRNISSEKSKRPDQFHIQLGLSAVETEDSKFVQE
LGRRIRDAEKGAQSQLAERFPVECKRDEETGRVRIKDSGNLAEHKEKNKEKGFVTNKMDG
QAFRDELKIGANAIPLSLSTMAKSKFEGVPRPLEENVEKTREEKQKPKERRYDKPREKNK
DKDREKKSHGKQKDKEKEKKKEEKAKDKSEHKKSQEDKSRDINKNGFIGLNNNKLPLISK
ENIAGTVNVGVVRKRKDVETNGFLHESELRHAKLLRPSSSQQPTQNGKKFDTHPKADLFS
SSKQEVATDIKVENKKHKVNGGIEGQPLCSAEAKASSIIPGAEDQIAEASKRPPHPDSKY
LSQILAVPKVDDWSGFDDQEWLLSERTPAKKTETCPDEVNKEHWVWSEALQIEAADVCAL
PYVIPY

Transcript Sequence

Gene sequence data has not been registered.